Next Generation Sequencing (NGS)/Method template

Each method section should have the following general format:


Here is a version you can copy paste:

== Overview ==
A brief description of the method here, broadly covering what we are doing and why.

=== Useful background ===
Links to other relevant sections of the wikibook, like this [[/RNA]].

=== Objective ===
What does the method achieve?

=== Biological questions ===
Why are we doing this?

== Inputs and outputs ==
=== Inputs ===
* A list of the pre-requirements for the method
** like
** this

=== Outputs ===
* A list of the outputs 
** like
** this

== Experimental design ==


== Typical steps in the method ==
Each step has it's own template, described below.

== Next steps ==
Discussion of where the method leads.

== Workflows ==

=== Example galaxy workflow ===
Link to an example galaxy workflow for for the method (including example datasets) on a given galaxy instance or to the XML document describing the workflow.

=== Example command line workflow ===


== Discussion ==
POV discussion about the method. 

Links to related discussion on BioStars:
* {{NGS/Biostars|q=your search keyword}}
* {{NGS/Biostars|q=your search keyword}}

Here is how it will look:

Overview

edit

A brief description of the method here, broadly covering what we are doing and why.

Useful background

edit

Links to other relevant sections of the wikibook, like this /RNA.

Objective

edit

What does the method achieve?

Biological questions

edit

Why are we doing this?

Inputs and outputs

edit

Inputs

edit
  • A list of the pre-requirements for the method
    • like
    • this

Outputs

edit
  • A list of the outputs
    • like
    • this

Experimental design

edit

Typical steps in the method

edit

Each step has it's own template, described below.

Next steps

edit

Discussion of where the method leads.

Workflows

edit

Example galaxy workflow

edit

Link to an example galaxy workflow for for the method (including example datasets) on a given galaxy instance or to the XML document describing the workflow.

Example command line workflow

edit

Discussion

edit

POV discussion about the method.

Links to related discussion on BioStar: